Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822365.1_cds_XP_016501094.1_14862
CDS Infomation

[gene=LOC107819498] [db_xref=GeneID:107819498] [protein=phosphoinositide phospholipase C 2-like isoform X2] [protein_id=XP_016501094.1] [location=join(83298..83615,84632..84828,85754..85889,85963..86193,86294..86526,87127..87244,88409..88561,88658..88744,88962..89255)] [gbkey=CDS]
Sequence

ATGTCGAGACAGACGTACAGAGTCTGTTTCTGTTTCCGGCGGCGGTTCCGGGTAGTCGCC
GCTGAGGCTCCGGCGGATGTGAAGAATTTATTCAATAAATATTCCGATAACGGAGTGATG
AATGCAGAGAACCTTCAACGATTCTTAATTGAGGTTCAGAAGGAGGAAAATTCGAGTATA
GAGGATGCTCAGGGTATTATGAATAATCTTCATGACCTTAAGATCCTTAATATTTTTCAT
CGGAGAGGTCTTCATCTTGACGCATTTTTTAAGTATCTTTTTGCTGATATTAATCCTCCT
ATTAATCCTAAACGTGGGATTCACCATGATATGAATGAGCCTTTGTCTCATTACTTCATA
TACACAGGACATAATTCCTATCTAACTGGGAATCAACTAAGTAGTGATTGCAGTGATGTT
CCCATAATACAAGCCCTGCACCGAGGTGTACGAGTAATTGAATTGGATATATGGCCAAAT
TCCGCCAAAGATGATGTGGAAGTTCTGCATGGAGGAACATTGACCACTCCGGTTGCGCTC
ATCAAATGTCTGAGGTCTATCAAGGAACATGCTTTTTCTGTATCTGAGTATCCTGTTGTG
ATAACACTTGAAGATCATTTAACCCCAGATCTTCAGGCAAAAGTTGCGGAGATGATCACT
CAAACATTTGGAGACATGCTGTTTTCTCCCGATTCATGTTTGAAAAACTTTCCCTCCCCA
GAATCTCTGAAAAGACGTGTTCTGATATCAACTAAGCCACCCAAAGAGTACCTTCAGGCG
AAGGAAGTTAAGGAAAAAGACTCGAAGAAAGGAACGGAGTCACCTGATACAGAAGCTTGG
GGAAGGGAAGTTTCAGACCTTAAAGCCAGATACAATGATAAGGATGATTCTGATGACGGA
GCAGGTGTGGAAGATGATGAAAGTGATGAAGGAGATCCCAACTCGCAGCAAAATGTCGCA
CCAGAATACAAGTGTTTAATTGCCATTCATGCTGGAAAGGGAAAAGGTGGATTGTCAGAT
TGGCTGAGGGTTGATCCTGATAAAGTAAGACGACTTAGCTTGAGTGAACAAGAACTTGGA
AAGGCTGTAGTTACTCATGGAAAAGAAATTATCAGGTTCACTCAGCGGAACTTGCTCAGA
ATATACCCAAAGGGCATACGTTTTGACTCATCCAATTACAATCCTTTTGTTGCATGGACG
CATGGAGCTCAAATGGTGGCATTCAATATGCAGGGCTATGGAAGATCACTTTGGTTAATG
CATGGTATGTTCAGATCCAATGGTGGTTGTGGATATGTTAAGAAACCAGATATATTATTG
AAAGCAGGTCCAAACAATCAGATCTTCGATCCTGAAGCAAATTTGCCAGTCAAAACTACA
TTGAAGGTGACCGTATTTATGGGTGAAGGGTGGTATTATGACTTCAATCACACGCACTTT
GATGCATACTCGCCTCCAGATTTCTATGCAAAGATAGGAATTGCCGGAGTTCCAGCTGAT
AATGTAATGAAGAAAACAAGGACTCTTGAGGACAATTGGATACCAACTTGGGATGAAAAG
TTTGAGTTCCCATTAACAGTTCCTGAGTTGGCTCTACTTCGCGTCGAAGTTCATGAGTAT
GATATGTCTGAAAAAGATGATTTTGCTGGCCAAACTTGTTTACCTGTTTCAGAACTAAGA
CAAGGTATTCGAGCAGTTTCACTACACGACCGAAAGGGAGAGAAATACAACTCTGTGAAG
CTTCTTATGCGTTTCGAATATGTCTAA

Peptide Sequence

PEP ID

XP_016501094.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 2-like isoform X2 [Nicotiana tabacum]
Sequence

MSRQTYRVCFCFRRRFRVVAAEAPADVKNLFNKYSDNGVMNAENLQRFLIEVQKEENSSI
EDAQGIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPINPKRGIHHDMNEPLSHYFI
YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL
IKCLRSIKEHAFSVSEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPDSCLKNFPSP
ESLKRRVLISTKPPKEYLQAKEVKEKDSKKGTESPDTEAWGREVSDLKARYNDKDDSDDG
AGVEDDESDEGDPNSQQNVAPEYKCLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQELG
KAVVTHGKEIIRFTQRNLLRIYPKGIRFDSSNYNPFVAWTHGAQMVAFNMQGYGRSLWLM
HGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEANLPVKTTLKVTVFMGEGWYYDFNHTHF
DAYSPPDFYAKIGIAGVPADNVMKKTRTLEDNWIPTWDEKFEFPLTVPELALLRVEVHEY
DMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGEKYNSVKLLMRFEYV

Transcript Sequence

Gene sequence data has not been registered.